PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G143500.1.p
Common NamePRUPE_ppa015724mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 358aa    MW: 39679.5 Da    PI: 5.0256
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G143500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.21.9e-102873271055
                         HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Prupe.8G143500.1.p 287 RKRREKINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 327
                         9******************97.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.76E-14276342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.332277326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-12280332IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-11283332IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.20E-12286331No hitNo description
PfamPF000109.9E-8287327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MDNAGWSSNG GMYTSDEEAD FMSQLLANCS VTNEMNEASS SSIPFAICPS HGYSTTNRED  60
IDQGSHYYSD FANLYFSNGI DTYGTANNGN YYTSDSHQIM PTNYHNSETS RCLWDANGVN  120
LFLSQGEQFG MDHHQELRNG NVEEHSNTNQ TGAAFSENLL QLKRESQHEM RIREPEMEIE  180
VMVPENSKKR PCSSVEVQKK KRNVKSKKGQ KPVLTGDIED NDASTKGQSS SSTSCSGDED  240
SNASHQDLSG GVSPSSFSPK GLEDLNLNCK KKASRGSATD SQSIYARKRR EKINERLRIL  300
QNLVPNGTKV DISTMLEEAV QYVKFLQLQI KLSSSDDMWM YAPIVHNGIN IGIDLNT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1269289KKKASRGSATDSQSIYARKRR
2286291RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007200203.10.0hypothetical protein PRUPE_ppa015724mg
TrEMBLM5VJX70.0M5VJX7_PRUPE; Uncharacterized protein
STRINGPOPTR_0009s09210.14e-83(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.18e-50bHLH family protein